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---
title: "TITLE"
author: "AUTHOR"
date: "`r format(Sys.time(), '%B %d %Y')`"
output:
bookdown::pdf_document2:
toc: false
number_sections: true
fig_caption: yes
highlight: "zenburn"
extra_dependencies: ['float','multicol']
bibliography: references.bib
link-citations: true
colorlinks: true
linkcolor: purple
urlcolor: blue
citecolor: red
header-includes:
- \usepackage{etoolbox}
- \usepackage[colorlinks=true,linkcolor=purple]{hyperref}
- \usepackage[toc,acronym,automake]{glossaries}
- \makeglossaries
editor_options:
markdown:
wrap: 72
---
```{r setup, include=FALSE}
knitr::opts_chunk$set(echo = TRUE, root.dir = 'render-files')
```
\tableofcontents
\newpage
<!-- If you have a number of topics, subdivide them in sections and organize papers under them -->
# Topic one
## Paper one [@Shin_2014]
\newglossaryentry{mr}{
name={Mendelian randomization},
description={Using genetic variants as instruments to infer causal effects}
}
\newacronym{gdm}{GDM}{Genetically Determined Metabotype}
Here is an example of learning new vocabilary such as \gls{mr} and defining it in the glossary.
## Short title of paper [@Suhre_2011]
# Topic two
\newpage
<!-- Add youtube channels and databse links here -->
# Online resources
- [Human Metabolome Database](https://www.hmdb.ca/)
\newpage
<!-- For listing and defining new vocabulary, done automatically -->
\printglossaries
\newpage
# References
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