From 511e3ca9e5235e018f772693907d9ec10002b02a Mon Sep 17 00:00:00 2001
From: Luca Coraggio <luca.coraggio@unina.it>
Date: Sat, 4 Jul 2020 09:50:03 +0000
Subject: version 1.0

---
 R/check_inputs.R | 64 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 64 insertions(+)
 create mode 100644 R/check_inputs.R

(limited to 'R/check_inputs.R')

diff --git a/R/check_inputs.R b/R/check_inputs.R
new file mode 100644
index 0000000..4cbcf0a
--- /dev/null
+++ b/R/check_inputs.R
@@ -0,0 +1,64 @@
+.check_input_data_matrix <- function(x, y, na.rm) {
+  if (is.null(y)) {
+    if (!is.array(x) & !is.data.frame(x) & !is.matrix(x)) {
+      stop("\"x\" must be a numeric matrix or any other array-type object that can be converted or a \"matrix\" object with with ncol>=2.\n\n")
+    }
+    if (is.vector(x)) {
+      stop("\"x\" must be a numeric matrix or any other array-type object that can be converted or a \"matrix\" object.  with with ncol>=2.\n\n")
+    }
+    if (!is.matrix(x)) {
+      x <- data.matrix(x)
+    }
+    if (!is.numeric(x)) {
+      stop("\"x\" must be numeric.")
+    }
+    if (nrow(x) < 2 | ncol(x) < 2) {
+      stop("nrow(x)>=2 and ncol(xa)>=2 are required\n\n")
+    }
+    is_na_data <- is.na(x)
+    if (any(is_na_data)) {
+      if (na.rm == FALSE) {
+        stop("\"x\" contains NA records. You may want to filter NAs by setting \"na.rm=TRUE\" (see documentation for more details).\n\n")
+      }
+      else {
+        idx_na <- which(rowSums(is_na_data) >= 1)
+        x <- x[-idx_na, , drop = FALSE]
+        if (nrow(x) < 2) {
+          stop("nrow(x)<2 after NA removal.\n\n")
+        }
+      }
+    }
+    if (any(!is.finite(x))) {
+      stop("\"x\" contains Inf values\n\n")
+    }
+  }
+  else {
+    if (!is.vector(x) | !is.vector(y)) {
+      stop("If \"y\" is given, \"x\" and  \"y\" must be both numeric.\n\n")
+    }
+    if (!is.numeric(x) | !is.numeric(y)) {
+      stop("\"x\" and \"y\" must be numeric.\n\n")
+    }
+    if (length(x) != length(y)) {
+      stop("\"x\" and \"y\" have different length.\n\n")
+    }
+    x <- cbind(x, y, deparse.level = 0)
+    is_na_data <- is.na(x)
+    if (any(is_na_data)) {
+      if (na.rm == FALSE) {
+        stop("\"x\" or \"y\" contains NA records. You may want to filter NAs by setting \"na.rm=TRUE\" (see documentation for more details).\n\n")
+      }
+      else {
+        idx_na <- which(rowSums(is_na_data) >= 1)
+        x <- x[-idx_na, , drop = FALSE]
+        if (nrow(x) < 2) {
+          stop("length(x)<2 and/or length(y)<2 after NA removal.\n\n")
+        }
+      }
+    }
+    if (any(!is.finite(x))) {
+      stop("\"x\" and/or \"y\"  contains Inf values\n\n")
+    }
+  }
+  return(x)
+}
-- 
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